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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | B.J. Surhoff | 21st | Tied for 17th | 24th | |
| First Basemen | Olmedo Saenz | 17th | Tied for 14th | 22nd | |
| Second Basemen | Bret Boone | 17th | Joe McEwing | Tied for 4th | 9th |
| Third Basemen | Phil Nevin | 5th | Tied for 14th | 12th | |
| Shortstops | Gary Sheffield | 2nd | Takahiro Ikeyama | 10th | 2nd |
| Left Fielders | Cliff Floyd | 4th | DaRond Stovall | Tied for 3rd | 2nd |
| Center Fielders | Tied for 22nd | Tied for 15th | Tied for 22nd | ||
| Right Fielders | Sammy Sosa | 1st | Derrick Gibson | Tied for 1st | 1st |
| Starting Pitchers | Frank Castillo | 8th | Tied for 18th | 16th | |
| Relievers | Darren Holmes | 10th | Curt Lyons | Tied for 9th | 7th |
| Closers | Darren Holmes | 10th | Curt Lyons | 10th | 10th |
