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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Todd Hundley | 7th | Kevin L Brown | 7th | 3rd |
| First Basemen | Howard Johnson | 23rd | Doug Mientkiewicz | 10th | 13th |
| Second Basemen | Tomas Perez | 20th | Wilton Guerrero | 11th | 11th |
| Third Basemen | Kevin Mitchell | 3rd | Aaron Boone | 3rd | 1st |
| Shortstops | Tied for 22nd | Deivi Cruz | Tied for 1st | 17th | |
| Left Fielders | Raul Ibanez | 13th | Jolbert Cabrera | 3rd | 5th |
| Center Fielders | Jermaine Allensworth | 11th | Tied for 15th | 18th | |
| Right Fielders | Bernard Gilkey | 11th | Tied for 12th | 15th | |
| Starting Pitchers | John Thomson | 16th | Carl Pavano | 1st | 2nd |
| Relievers | Mike Draper | 21st | Dario Veras | 9th | 18th |
| Closers | Steve Karsay | 7th | Dario Veras | 11th | 6th |
