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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | A J Pierzynski | 18th | Raul Chavez | 10th | 11th |
| First Basemen | Derrek Lee | 9th | Travis Lee | 4th | 4th |
| Second Basemen | 24th | Carter Haney | 7th | 24th | |
| Third Basemen | Travis Fryman | 11th | Kenjiro Nomura | 7th | 7th |
| Shortstops | Kevin Stocker | 15th | Tied for 12th | 19th | |
| Left Fielders | Ray Lankford | 13th | Tied for 12th | 17th | |
| Center Fielders | Ryan Thompson | 18th | Tied for 10th | 20th | |
| Right Fielders | Bobby Abreu | 4th | Tied for 11th | 10th | |
| Starting Pitchers | Chris Carpenter | 18th | Roy Halladay | Tied for 3rd | 11th |
| Relievers | Rich Loiselle | 17th | Vladimir Nunez | 17th | 17th |
| Closers | Rich Loiselle | 21st | Vladimir Nunez | 17th | 20th |
