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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Jason Varitek | 13th | Tied for 13th | 18th | |
| First Basemen | Ryan Klesko | 7th | Fernando Seguignol | 3rd | 2nd |
| Second Basemen | Bill Spiers | 15th | Pokey Reese | Tied for 2nd | 5th |
| Third Basemen | Joe Randa | 19th | Tied for 10th | 21st | |
| Shortstops | Pat F. Kelly | 18th | Tied for 12th | 22nd | |
| Left Fielders | Brian L Hunter | 24th | Tied for 12th | 24th | |
| Center Fielders | Torii Hunter | 5th | Tied for 10th | 14th | |
| Right Fielders | Derek Bell | 14th | Tied for 11th | 17th | |
| Starting Pitchers | Greg Maddux | 9th | Seth Greisinger | 12th | 7th |
| Relievers | Scott Radinsky | 14th | Tied for 21st | 21st | |
| Closers | Scott Radinsky | 20th | Tied for 21st | 24th |
