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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | B.J. Surhoff | 23rd | Tied for 15th | 24th | |
| First Basemen | Olmedo Saenz | 14th | Tied for 12th | 18th | |
| Second Basemen | Bret Boone | 19th | Joe McEwing | Tied for 3rd | 8th |
| Third Basemen | Phil Nevin | 5th | Tied for 14th | 14th | |
| Shortstops | Gary Sheffield | 2nd | Takahiro Ikeyama | 11th | 3rd |
| Left Fielders | Cliff Floyd | 2nd | DaRond Stovall | Tied for 2nd | 1st |
| Center Fielders | Tied for 22nd | Tied for 13th | Tied for 23rd | ||
| Right Fielders | Sammy Sosa | 2nd | Derrick Gibson | Tied for 1st | 1st |
| Starting Pitchers | Frank Castillo | 8th | Tied for 17th | 18th | |
| Relievers | Darren Holmes | 17th | Curt Lyons | Tied for 12th | 16th |
| Closers | Jim Bullinger | 14th | Curt Lyons | Tied for 12th | 12th |
